RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02820.1 View Network Show in Genome Browser |
| Other Names | Os05g0119700 |
| Description | protein transport protein-related, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1013986-1017612 Nucleotide Length: 2670 |
| Protein-coding | LOC_Os05g02820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73110 LOC_Os03g14610 LOC_Os03g61620 LOC_Os03g12250 LOC_Os01g59150 LOC_Os03g15630 LOC_Os01g51840 LOC_Os03g20500 LOC_Os03g14170 LOC_Os03g28330 LOC_Os04g42620 More.. |
| Downstream Genes | LOC_Os07g44350 LOC_Os11g26190 LOC_Os06g36050 LOC_Os07g38590 LOC_Os12g42430 LOC_Os07g48370 LOC_Os05g48270 LOC_Os09g13650 LOC_Os06g42800 LOC_Os12g39620 LOC_Os12g07160 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00250 rn01100 |
| Metacyc Pathways | DENOVOPURINE2-PWY PWY-841 P121-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02820.1 |
| Rice Genome Annotation | LOC_Os05g02820.1 |
| Ricechip | LOC_Os05g02820.1 |
| KEGG | osa:4337641 dosa:Os05t0119700-01 |
| Entrez-Gene | 4337641 |