RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g08360.1 View Network Show in Genome Browser |
| Other Names | Os05g0176000 |
| Description | rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4559242-4562425 Nucleotide Length: 930 |
| Protein-coding | LOC_Os05g08360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22880 LOC_Os03g22740 LOC_Os03g22730 LOC_Os03g22350 LOC_Os02g49610 LOC_Os03g25450 LOC_Os03g18570 LOC_Os01g33030 LOC_Os03g58204 LOC_Os03g18580 LOC_Os04g51630 More.. |
| Downstream Genes | LOC_Os06g16290 LOC_Os08g31810 LOC_Os07g08330 LOC_Os07g10350 LOC_Os07g44190 LOC_Os05g27940 LOC_Os10g35280 LOC_Os08g02410 LOC_Os08g02400 LOC_Os12g06910 LOC_Os08g03640 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g08360.1 |
| Rice Genome Annotation | LOC_Os05g08360.1 |
| Ricechip | LOC_Os05g08360.1 |
| KEGG | osa:9266224 dosa:Os05t0176000-01 |
| Entrez-Gene | 9266224 |