RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g13950.1 View Network Show in Genome Browser |
| Other Names | Os05g0227700 |
| Description | eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 7762075-7768326 Nucleotide Length: 1590 |
| Protein-coding | LOC_Os05g13950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07490 LOC_Os03g40180 LOC_Os01g65220 LOC_Os01g03070 LOC_Os01g58220 LOC_Os02g39720 LOC_Os02g05330 LOC_Os04g02820 LOC_Os02g32030 LOC_Os03g08450 LOC_Os01g64490 More.. |
| Downstream Genes | LOC_Os11g45590 LOC_Os07g12110 LOC_Os05g19370 LOC_Os05g49150 LOC_Os07g07250 LOC_Os07g34589 LOC_Os06g45590 LOC_Os06g48750 LOC_Os05g41900 LOC_Os07g32040 LOC_Os08g44450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g13950.1 |
| Rice Genome Annotation | LOC_Os05g13950.1 |
| Ricechip | LOC_Os05g13950.1 |
| KEGG | osa:4338152 dosa:Os05t0227700-01 |
| Entrez-Gene | 4338152 |