RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g31000.1 View Network Show in Genome Browser |
| Other Names | Os05g0373700 |
| Description | nascent polypeptide-associated complex subunit alpha, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18012300-18014418 Nucleotide Length: 618 |
| Protein-coding | LOC_Os05g31000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63400 LOC_Os03g01910 LOC_Os03g10340 LOC_Os04g50990 LOC_Os03g18570 LOC_Os03g18580 LOC_Os01g59990 LOC_Os03g60400 LOC_Os01g61814 LOC_Os01g22490 LOC_Os04g39700 More.. |
| Downstream Genes | LOC_Os05g48310 LOC_Os07g12250 LOC_Os10g34180 LOC_Os05g48220 LOC_Os08g02410 LOC_Os07g10720 LOC_Os05g40820 LOC_Os08g02400 LOC_Os08g44480 LOC_Os07g44740 LOC_Os09g32976 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g31000.1 |
| Rice Genome Annotation | LOC_Os05g31000.1 |
| Ricechip | LOC_Os05g31000.1 |
| KEGG | osa:4338602 dosa:Os05t0373700-01 |
| Entrez-Gene | 4338602 |