RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g34150.1 View Network Show in Genome Browser |
| Other Names | Os05g0412800 |
| Description | glutathione S-transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 20192361-20193786 Nucleotide Length: 825 |
| Protein-coding | LOC_Os05g34150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70960 LOC_Os05g23620 LOC_Os02g32120 LOC_Os04g32660 LOC_Os01g54540 LOC_Os04g17050 LOC_Os04g42930 LOC_Os03g63420 LOC_Os03g48850 LOC_Os02g12800 LOC_Os01g25100 More.. |
| Downstream Genes | LOC_Os12g10604 LOC_Os07g09310 LOC_Os11g37730 LOC_Os06g37440 LOC_Os10g36210 LOC_Os07g46440 LOC_Os12g03090 LOC_Os11g03400 LOC_Os07g01870 LOC_Os11g42350 LOC_Os07g08840 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 |
| Metacyc Pathways | PWY-4061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g34150.1 |
| Rice Genome Annotation | LOC_Os05g34150.1 |
| Ricechip | LOC_Os05g34150.1 |
| KEGG | osa:4338787 dosa:Os05t0412800-01 |
| Entrez-Gene | 4338787 |