RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g37330.1 View Network Show in Genome Browser
Other Names	Os05g0445500
Description	60S acidic ribosomal protein, putative, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 21835415-21837683 Nucleotide Length: 342
Protein-coding	LOC_Os05g37330

Gene Ontology Classification
GO	Name	Type	Code
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005730	nucleolus	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0005840	ribosome	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g67134 LOC_Os04g50990 LOC_Os02g47140 LOC_Os02g14059 LOC_Os05g19370 LOC_Os03g40180 LOC_Os01g61814 LOC_Os01g54870 LOC_Os05g28750 LOC_Os03g60400 LOC_Os03g58050 More..
Downstream Genes	LOC_Os08g02340 LOC_Os11g05562 LOC_Os08g03640 LOC_Os12g03880 LOC_Os11g04070 LOC_Os08g44480 LOC_Os09g39540 LOC_Os07g05580 LOC_Os05g41110 LOC_Os07g07709 LOC_Os07g08330 More..

miRNA Regulations
miRNAs	osa-miR415

Database Links
Gramene	LOC_Os05g37330.1
Rice Genome Annotation	LOC_Os05g37330.1
Ricechip	LOC_Os05g37330.1
KEGG	osa:4338938 dosa:Os05t0445500-01
Entrez-Gene	4338938