RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g39960.1 View Network Show in Genome Browser |
| Other Names | Os05g0477300 |
| Description | 40S ribosomal protein S26, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23483078-23485777 Nucleotide Length: 411 |
| Protein-coding | LOC_Os05g39960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g14059 LOC_Os05g11710 LOC_Os01g10820 LOC_Os02g18380 LOC_Os02g27760 LOC_Os01g59990 LOC_Os03g60400 LOC_Os01g61814 LOC_Os03g58430 LOC_Os01g54870 LOC_Os04g28180 More.. |
| Downstream Genes | LOC_Os06g35730 LOC_Os07g10720 LOC_Os07g12250 LOC_Os10g41470 LOC_Os07g08660 LOC_Os05g40820 LOC_Os05g49030 LOC_Os07g47780 LOC_Os09g24690 LOC_Os09g39500 LOC_Os11g29190 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g39960.1 |
| Rice Genome Annotation | LOC_Os05g39960.1 |
| Ricechip | LOC_Os05g39960.1 |
| KEGG | osa:4339104 dosa:Os05t0477300-03 |
| Entrez-Gene | 4339104 |