RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41210.1 View Network Show in Genome Browser |
| Other Names | Os05g0491100 |
| Description | OsCam2 - Calmodulin, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24132441-24134899 Nucleotide Length: 450 |
| Protein-coding | LOC_Os05g41210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g48140 LOC_Os02g02750 LOC_Os02g55880 LOC_Os03g53660 LOC_Os02g10740 LOC_Os03g59590 LOC_Os02g57190 LOC_Os03g51600 LOC_Os03g25070 LOC_Os01g62570 LOC_Os02g36974 More.. |
| Downstream Genes | LOC_Os06g29350 LOC_Os12g37560 LOC_Os06g51250 LOC_Os08g25010 LOC_Os08g44390 LOC_Os06g40200 LOC_Os08g27850 LOC_Os12g12860 LOC_Os07g44710 LOC_Os06g10280 LOC_Os11g14220 More.. |
| Reference | |
|---|---|
| PubMed | 21908855 16053710 17263873 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41210.1 |
| Rice Genome Annotation | LOC_Os05g41210.1 |
| Ricechip | LOC_Os05g41210.1 |
| KEGG | osa:4339172 dosa:Os05t0491100-01 |
| Entrez-Gene | 4339172 |