RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46270.1 View Network Show in Genome Browser |
| Other Names | Os05g0540100 |
| Description | FEN1A - Putative flap endonuclease protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26830170-26834200 Nucleotide Length: 1020 |
| Protein-coding | LOC_Os05g46270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56130 LOC_Os02g53680 LOC_Os05g19270 LOC_Os03g15810 LOC_Os02g56100 LOC_Os03g30934 LOC_Os01g67250 LOC_Os02g42230 LOC_Os01g58680 LOC_Os03g12610 LOC_Os02g37920 More.. |
| Downstream Genes | LOC_Os10g34750 LOC_Os06g07210 LOC_Os11g29390 LOC_Os07g22400 LOC_Os11g03430 LOC_Os12g03130 LOC_Os09g24220 LOC_Os12g26060 LOC_Os11g08330 LOC_Os07g38760 LOC_Os06g16390 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46270.1 |
| Rice Genome Annotation | LOC_Os05g46270.1 |
| Ricechip | LOC_Os05g46270.1 |
| KEGG | osa:4339464 dosa:Os05t0540100-01 |
| Entrez-Gene | 4339464 |