RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46290.1 View Network Show in Genome Browser |
| Other Names | Os05g0540300 |
| Description | T-complex protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26835671-26840314 Nucleotide Length: 1746 |
| Protein-coding | LOC_Os05g46290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g25050 LOC_Os02g54060 LOC_Os03g59020 LOC_Os01g36600 LOC_Os04g58830 LOC_Os05g08360 LOC_Os02g57590 LOC_Os03g22880 LOC_Os02g14929 LOC_Os02g53420 LOC_Os03g02260 More.. |
| Downstream Genes | LOC_Os07g44740 LOC_Os10g41710 LOC_Os09g26730 LOC_Os06g09688 LOC_Os06g09679 LOC_Os06g34690 LOC_Os09g29840 LOC_Os12g38310 LOC_Os08g09350 LOC_Os07g12890 LOC_Os06g02600 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46290.1 |
| Rice Genome Annotation | LOC_Os05g46290.1 |
| Ricechip | LOC_Os05g46290.1 |
| KEGG | osa:4339466 dosa:Os05t0540300-01 |
| Entrez-Gene | 4339466 |