RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49150.1 View Network Show in Genome Browser |
| Other Names | Os05g0566500 |
| Description | eukaryotic translation initiation factor 3 subunit D, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28202084-28204227 Nucleotide Length: 1758 |
| Protein-coding | LOC_Os05g49150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g49270 LOC_Os03g22880 LOC_Os03g22740 LOC_Os02g05330 LOC_Os03g22730 LOC_Os03g08440 LOC_Os02g03890 LOC_Os04g42010 LOC_Os04g30780 LOC_Os03g18580 LOC_Os03g18570 More.. |
| Downstream Genes | LOC_Os06g48750 LOC_Os09g37860 LOC_Os12g13390 LOC_Os06g48350 LOC_Os09g15770 LOC_Os07g08330 LOC_Os12g05430 LOC_Os08g44450 LOC_Os06g35730 LOC_Os09g07820 LOC_Os07g42450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49150.1 |
| Rice Genome Annotation | LOC_Os05g49150.1 |
| Ricechip | LOC_Os05g49150.1 |
| KEGG | osa:4339634 dosa:Os05t0566500-01 |
| Entrez-Gene | 4339634 |