RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g06090.1 View Network Show in Genome Browser |
| Other Names | Os06g0154500 |
| Description | CGMC_MAPKCMGC_2_ERK.12 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2806543-2813004 Nucleotide Length: 1197 |
| Protein-coding | LOC_Os06g06090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32660 LOC_Os02g15810 LOC_Os06g05520 LOC_Os05g26890 LOC_Os03g17700 LOC_Os01g69920 LOC_Os03g39710 LOC_Os01g38670 LOC_Os03g46650 LOC_Os01g74000 LOC_Os05g45420 More.. |
| Downstream Genes | LOC_Os12g07590 LOC_Os06g20340 LOC_Os06g27890 LOC_Os12g12860 LOC_Os07g44710 LOC_Os09g19734 LOC_Os10g41930 LOC_Os10g42950 LOC_Os09g20640 LOC_Os11g10100 LOC_Os06g36770 More.. |
| Reference | |
|---|---|
| PubMed | 16673940 22437844 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g06090.1 |
| Rice Genome Annotation | LOC_Os06g06090.1 |
| Ricechip | LOC_Os06g06090.1 |
| KEGG | osa:4340170 dosa:Os06t0154500-01 |
| Entrez-Gene | 4340170 |