RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g11320.1 View Network Show in Genome Browser |
| Other Names | Os06g0216800 |
| Description | peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 5933788-5939645 Nucleotide Length: 1191 |
| Protein-coding | LOC_Os06g11320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os02g43020 LOC_Os03g16920 LOC_Os04g45480 LOC_Os05g44340 LOC_Os05g48810 LOC_Os04g01740 LOC_Os03g53910 LOC_Os05g38530 More.. |
| Downstream Genes | LOC_Os09g30412 LOC_Os09g30418 LOC_Os08g39140 LOC_Os08g36150 LOC_Os06g41750 LOC_Os11g47760 LOC_Os07g07260 LOC_Os11g18170 LOC_Os12g41190 LOC_Os10g32300 LOC_Os09g36740 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g11320.1 |
| Rice Genome Annotation | LOC_Os06g11320.1 |
| Ricechip | LOC_Os06g11320.1 |
| KEGG | osa:4340493 dosa:Os06t0216800-01 |
| Entrez-Gene | 4340493 |