RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g21480.1 View Network Show in Genome Browser |
| Other Names | Os06g0319700 |
| Description | 60S ribosomal protein L31, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 12412525-12415341 Nucleotide Length: 375 |
| Protein-coding | LOC_Os06g21480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g24690 LOC_Os05g39960 LOC_Os04g42270 LOC_Os02g47140 LOC_Os02g27760 LOC_Os04g50990 LOC_Os03g04590 LOC_Os02g56960 LOC_Os05g38520 LOC_Os01g62350 LOC_Os05g48310 More.. |
| Downstream Genes | LOC_Os07g10660 LOC_Os07g10720 LOC_Os10g32920 LOC_Os08g06040 LOC_Os09g24690 LOC_Os08g33920 LOC_Os07g12250 LOC_Os09g32976 LOC_Os08g23710 LOC_Os09g39500 LOC_Os09g31180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g21480.1 |
| Rice Genome Annotation | LOC_Os06g21480.1 |
| Ricechip | LOC_Os06g21480.1 |
| KEGG | osa:4340887 dosa:Os06t0319700-01 |
| Entrez-Gene | 4340887 |