RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g25439.1 View Network Show in Genome Browser |
| Other Names | Os06g0360300 |
| Description | NAD dependent epimerase/dehydratase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 14880480-14881940 Nucleotide Length: 342 |
| Protein-coding | LOC_Os06g25439 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g36960 LOC_Os06g12580 LOC_Os04g56646 LOC_Os02g10640 LOC_Os05g48450 LOC_Os01g62870 LOC_Os02g33450 LOC_Os03g51080 LOC_Os01g62860 LOC_Os02g40830 LOC_Os03g53400 More.. |
| Downstream Genes | LOC_Os06g40560 LOC_Os08g36320 LOC_Os08g05830 LOC_Os10g40200 LOC_Os08g04460 LOC_Os12g07590 LOC_Os11g18170 LOC_Os10g42250 LOC_Os06g46770 LOC_Os07g30300 LOC_Os11g16410 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-2582 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g25439.1 |
| Rice Genome Annotation | LOC_Os06g25439.1 |
| Ricechip | LOC_Os06g25439.1 |
| KEGG | osa:4340998 dosa:Os06t0360300-01 |
| Entrez-Gene | 4340998 |