RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g05580.1 View Network Show in Genome Browser |
| Other Names | Os07g0150200 |
| Description | ribosomal protein L7Ae, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2614127-2616106 Nucleotide Length: 417 |
| Protein-coding | LOC_Os07g05580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g18380 LOC_Os03g40180 LOC_Os05g19370 LOC_Os02g01332 LOC_Os05g11710 LOC_Os02g14059 LOC_Os01g10820 LOC_Os06g35730 LOC_Os01g61814 LOC_Os03g38000 LOC_Os03g60400 More.. |
| Downstream Genes | LOC_Os09g31180 LOC_Os10g41470 LOC_Os07g10720 LOC_Os10g27190 LOC_Os11g24610 LOC_Os08g44480 LOC_Os09g24690 LOC_Os08g02410 LOC_Os07g07709 LOC_Os07g12250 LOC_Os08g06040 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g05580.1 |
| Rice Genome Annotation | LOC_Os07g05580.1 |
| Ricechip | LOC_Os07g05580.1 |
| KEGG | osa:4342408 dosa:Os07t0150200-01 |
| Entrez-Gene | 4342408 |