RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g25590.1 View Network Show in Genome Browser |
| Other Names | Os07g0437500 |
| Description | decarboxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 14669735-14676409 Nucleotide Length: 1410 |
| Protein-coding | LOC_Os07g25590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g33710 LOC_Os03g51080 LOC_Os04g58110 LOC_Os05g02510 LOC_Os01g01080 LOC_Os06g51060 LOC_Os05g33140 LOC_Os05g33130 LOC_Os03g55200 LOC_Os02g58460 LOC_Os01g16960 More.. |
| Downstream Genes | LOC_Os08g45180 LOC_Os12g03720 LOC_Os11g03900 LOC_Os10g31520 LOC_Os12g07290 LOC_Os10g42960 LOC_Os07g45290 LOC_Os07g44140 LOC_Os07g31140 LOC_Os12g18110 LOC_Os07g38600 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00350 rn00950 rn01110 rn01100 rn00965 |
| Metacyc Pathways | PWY-3581 PWY-6133 PWY-5474 PWY-5254 |
| Reference | |
|---|---|
| PubMed | 17763868 19439571 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g25590.1 |
| Rice Genome Annotation | LOC_Os07g25590.1 |
| Ricechip | LOC_Os07g25590.1 |
| KEGG | osa:4343080 dosa:Os07t0437500-01 |
| Entrez-Gene | 4343080 |