RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g49220.1 View Network Show in Genome Browser |
| Other Names | Os07g0692800 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 29476238-29478532 Nucleotide Length: 1017 |
| Protein-coding | LOC_Os07g49220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21550 LOC_Os03g44310 LOC_Os07g48300 LOC_Os02g56740 LOC_Os06g48350 LOC_Os04g27860 LOC_Os02g27769 LOC_Os01g03070 LOC_Os04g32710 LOC_Os07g01870 LOC_Os06g23440 More.. |
| Downstream Genes | LOC_Os12g31380 LOC_Os12g41400 LOC_Os12g07740 LOC_Os10g25320 LOC_Os09g15770 LOC_Os12g42260 LOC_Os11g24610 LOC_Os10g41960 LOC_Os10g27190 LOC_Os12g05430 LOC_Os09g32976 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g49220.1 |
| Rice Genome Annotation | LOC_Os07g49220.1 |
| Ricechip | LOC_Os07g49220.1 |
| KEGG | osa:4344379 dosa:Os07t0692800-00 |
| Entrez-Gene | 4344379 |