RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g06040.1 View Network Show in Genome Browser |
| Other Names | Os08g0156800 |
| Description | 60S ribosomal protein L34, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 3293123-3295909 Nucleotide Length: 357 |
| Protein-coding | LOC_Os08g06040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28750 LOC_Os01g19840 LOC_Os04g35090 LOC_Os01g61814 LOC_Os04g50990 LOC_Os03g60400 LOC_Os03g31090 LOC_Os07g42950 LOC_Os02g34460 LOC_Os05g48310 LOC_Os02g47140 More.. |
| Downstream Genes | LOC_Os10g27190 LOC_Os12g05430 LOC_Os08g39500 LOC_Os09g39540 LOC_Os10g41470 LOC_Os09g08430 LOC_Os11g03400 LOC_Os08g44480 LOC_Os09g39500 LOC_Os09g31180 LOC_Os11g05562 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g06040.1 |
| Rice Genome Annotation | LOC_Os08g06040.1 |
| Ricechip | LOC_Os08g06040.1 |
| KEGG | osa:4344696 dosa:Os08t0156800-01 |
| Entrez-Gene | 4344696 |