RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g10608.1 View Network Show in Genome Browser |
| Other Names | Os08g0207000 |
| Description | ribosomal protein S17, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 6243947-6247147 Nucleotide Length: 480 |
| Protein-coding | LOC_Os08g10608 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g37970 LOC_Os06g02510 LOC_Os03g40180 LOC_Os07g10720 LOC_Os05g19370 LOC_Os08g02410 LOC_Os02g27760 LOC_Os08g02400 LOC_Os07g01870 LOC_Os02g56960 LOC_Os03g04590 More.. |
| Downstream Genes | LOC_Os09g31180 LOC_Os10g32920 LOC_Os10g32820 LOC_Os09g08430 LOC_Os11g38959 LOC_Os08g41810 LOC_Os11g03400 LOC_Os12g38000 LOC_Os12g03090 LOC_Os12g21798 LOC_Os09g32976 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g10608.1 |
| Rice Genome Annotation | LOC_Os08g10608.1 |
| Ricechip | LOC_Os08g10608.1 |
| KEGG | osa:4344935 dosa:Os08t0207000-01 |
| Entrez-Gene | 4344935 |