RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os08g13930.1 View Network Show in Genome Browser
Other Names	Os08g0237200
Description	mannose-1-phosphate guanyltransferase, putative, expressed
Gene Attributes	Chromosome: Chr8 CDS Coordinates (5'-3'): 8342181-8344712 Nucleotide Length: 1086
Protein-coding	LOC_Os08g13930

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os07g42450 LOC_Os03g08440 LOC_Os02g11830 LOC_Os05g45710 More..
Downstream Genes	LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os10g42950 LOC_Os09g32680 LOC_Os11g29190 LOC_Os11g11390 LOC_Os12g25710 LOC_Os11g14220 LOC_Os11g04070 LOC_Os10g35290 More..

Pathways
KEGG Pathways	rn00040 rn00052 rn00500 rn00520 rn01100 rn01110
Metacyc Pathways	PWY-882 DTDPRHAMSYN-PWY PWY-3821 P61-PWY GALACTMETAB-PWY PWY-621 PWY-3801 SUCSYN-PWY COLANSYN-PWY PWY-5067 PWY3DJ-35471 PWY-6527 UDPNACETYLGALSYN-PWY

Database Links
Gramene	LOC_Os08g13930.1
Rice Genome Annotation	LOC_Os08g13930.1
Ricechip	LOC_Os08g13930.1
KEGG	osa:4345021 dosa:Os08t0237200-01
Entrez-Gene	4345021