RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g22354.1 View Network Show in Genome Browser |
| Other Names | Os08g0314800 |
| Description | polyadenylate-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 13471744-13479204 Nucleotide Length: 1983 |
| Protein-coding | LOC_Os08g22354 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16920 LOC_Os06g48750 LOC_Os02g05330 LOC_Os05g38530 LOC_Os01g62290 LOC_Os07g36940 LOC_Os01g67134 LOC_Os03g60620 LOC_Os07g08330 LOC_Os03g08440 LOC_Os07g42450 More.. |
| Downstream Genes | LOC_Os11g06750 LOC_Os12g07010 LOC_Os10g41960 LOC_Os11g47760 LOC_Os11g04070 LOC_Os12g03880 LOC_Os12g38000 LOC_Os12g21798 LOC_Os10g27190 LOC_Os09g32976 LOC_Os08g23710 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g22354.1 |
| Rice Genome Annotation | LOC_Os08g22354.1 |
| Ricechip | LOC_Os08g22354.1 |
| KEGG | osa:4345242 dosa:Os08t0314800-01 |
| Entrez-Gene | 4345242 |