RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g31810.1 View Network Show in Genome Browser |
| Other Names | Os08g0412200 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 19721207-19725995 Nucleotide Length: 645 |
| Protein-coding | LOC_Os08g31810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g37870 LOC_Os03g22740 LOC_Os03g22730 LOC_Os03g22880 LOC_Os07g29320 LOC_Os03g49210 LOC_Os03g61560 LOC_Os03g22350 LOC_Os01g33050 LOC_Os07g19190 LOC_Os05g08360 More.. |
| Downstream Genes | LOC_Os10g31520 LOC_Os11g01420 LOC_Os12g01430 LOC_Os10g35280 LOC_Os08g39820 LOC_Os09g37860 LOC_Os12g09280 LOC_Os12g36950 LOC_Os09g35670 LOC_Os12g04010 LOC_Os12g29660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g31810.1 |
| Rice Genome Annotation | LOC_Os08g31810.1 |
| Ricechip | LOC_Os08g31810.1 |
| KEGG | osa:4345558 dosa:Os08t0412200-01 |
| Entrez-Gene | 4345558 |