RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g42920.1 View Network Show in Genome Browser |
| Other Names | Os08g0542100 |
| Description | 60S ribosomal protein L7, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27127760-27129724 Nucleotide Length: 747 |
| Protein-coding | LOC_Os08g42920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g01859 LOC_Os07g10660 LOC_Os04g58830 LOC_Os03g59310 LOC_Os03g29460 LOC_Os02g07890 LOC_Os01g61814 LOC_Os08g09350 LOC_Os02g27760 LOC_Os02g01560 LOC_Os04g42270 More.. |
| Downstream Genes | LOC_Os10g32550 LOC_Os09g08430 LOC_Os09g24690 LOC_Os10g32920 LOC_Os10g41410 LOC_Os12g07010 LOC_Os10g41470 LOC_Os11g06750 LOC_Os09g33770 LOC_Os12g05430 LOC_Os09g33720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g42920.1 |
| Rice Genome Annotation | LOC_Os08g42920.1 |
| Ricechip | LOC_Os08g42920.1 |
| KEGG | osa:4346195 dosa:Os08t0542100-01 |
| Entrez-Gene | 4346195 |