RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44380.1 View Network Show in Genome Browser |
| Other Names | Os08g0558000 |
| Description | L1P family of ribosomal proteins domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27929349-27932677 Nucleotide Length: 651 |
| Protein-coding | LOC_Os08g44380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47140 LOC_Os04g50990 LOC_Os03g18570 LOC_Os05g27940 LOC_Os03g18580 LOC_Os03g59310 LOC_Os03g22180 LOC_Os05g28750 LOC_Os01g19840 LOC_Os04g28180 LOC_Os05g30530 More.. |
| Downstream Genes | LOC_Os12g38000 LOC_Os11g29190 LOC_Os09g31180 LOC_Os11g11390 LOC_Os10g27174 LOC_Os12g03880 LOC_Os11g04070 LOC_Os11g05562 LOC_Os10g08930 LOC_Os09g32976 LOC_Os12g21798 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44380.1 |
| Rice Genome Annotation | LOC_Os08g44380.1 |
| Ricechip | LOC_Os08g44380.1 |
| KEGG | osa:9268245 dosa:Os08t0558000-01 |
| Entrez-Gene | 9268245 |