RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g02700.1 View Network Show in Genome Browser |
| Other Names | Os09g0115400 |
| Description | polyadenylate-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 1212856-1218011 Nucleotide Length: 1989 |
| Protein-coding | LOC_Os09g02700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g48750 LOC_Os02g05330 LOC_Os03g16920 LOC_Os05g27940 LOC_Os07g08330 LOC_Os07g36940 LOC_Os01g67134 LOC_Os07g42450 LOC_Os03g08440 LOC_Os05g30530 LOC_Os01g73880 More.. |
| Downstream Genes | LOC_Os11g06750 LOC_Os12g07010 LOC_Os11g04070 LOC_Os12g38000 LOC_Os12g03880 LOC_Os12g21798 LOC_Os10g27190 LOC_Os09g32976 LOC_Os09g08430 LOC_Os12g43600 LOC_Os11g11390 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR168a-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g02700.1 |
| Rice Genome Annotation | LOC_Os09g02700.1 |
| Ricechip | LOC_Os09g02700.1 |
| KEGG | osa:4346409 dosa:Os09t0115400-01 |
| Entrez-Gene | 4346409 |