RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g15770.1 View Network Show in Genome Browser |
| Other Names | Os09g0326900 |
| Description | CPuORF13 - conserved peptide uORF-containing transcript, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 9634451-9638121 Nucleotide Length: 1353 |
| Protein-coding | LOC_Os09g15770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03070 LOC_Os08g21660 LOC_Os05g16660 LOC_Os07g03230 LOC_Os05g38520 LOC_Os01g62350 LOC_Os07g33997 LOC_Os07g33921 LOC_Os07g33898 LOC_Os07g26740 LOC_Os08g02410 More.. |
| Downstream Genes | LOC_Os10g41960 LOC_Os12g41400 LOC_Os12g07740 LOC_Os09g31180 LOC_Os09g32976 LOC_Os11g05562 LOC_Os10g32920 LOC_Os09g24690 LOC_Os10g27190 LOC_Os09g32532 LOC_Os09g32520 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g15770.1 |
| Rice Genome Annotation | LOC_Os09g15770.1 |
| Ricechip | LOC_Os09g15770.1 |
| KEGG | osa:4346742 dosa:Os09t0326900-01 |
| Entrez-Gene | 4346742 |