RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g23070.1 View Network Show in Genome Browser |
| Other Names | Os09g0394100 |
| Description | malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 13626116-13629839 Nucleotide Length: 1554 |
| Protein-coding | LOC_Os09g23070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g55410 LOC_Os01g37910 LOC_Os07g14070 LOC_Os07g14030 LOC_Os07g03730 LOC_Os02g27300 LOC_Os01g28450 LOC_Os06g22080 LOC_Os02g48350 LOC_Os01g27630 LOC_Os01g27210 More.. |
| Downstream Genes | LOC_Os12g15400 LOC_Os10g11500 LOC_Os12g42850 LOC_Os12g01370 LOC_Os09g38620 LOC_Os11g01340 LOC_Os12g37630 LOC_Os12g07110 LOC_Os12g18110 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00410 rn00640 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g23070.1 |
| Rice Genome Annotation | LOC_Os09g23070.1 |
| Ricechip | LOC_Os09g23070.1 |
| KEGG | osa:4346967 dosa:Os09t0394100-01 |
| Entrez-Gene | 4346967 |