RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g24440.1 View Network Show in Genome Browser |
| Other Names | Os09g0410300,Os09g0409950,Os09g0410125 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 14531190-14547560 Nucleotide Length: 4614 |
| Protein-coding | LOC_Os09g24440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g44030 LOC_Os03g29470 LOC_Os03g45410 LOC_Os01g63940 LOC_Os07g38360 LOC_Os06g43790 LOC_Os01g32750 LOC_Os01g48810 LOC_Os05g28010 LOC_Os07g22950 LOC_Os07g42150 More.. |
| Downstream Genes | LOC_Os09g26180 LOC_Os12g39070 LOC_Os10g29560 LOC_Os10g29660 LOC_Os12g07050 LOC_Os10g42950 LOC_Os09g39590 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g24440.1 |
| Rice Genome Annotation | LOC_Os09g24440.1 |
| Ricechip | LOC_Os09g24440.1 |
| KEGG | osa:4347029 dosa:Os09t0410300-01dosa:Os09t0409950-01dosa:Os09t0410125-00 |
| Entrez-Gene | 4347029 |