RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g38620.1 View Network Show in Genome Browser |
| Other Names | Os09g0558900 |
| Description | NADPH reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22212390-22218252 Nucleotide Length: 2145 |
| Protein-coding | LOC_Os09g38620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g04460 LOC_Os05g40990 LOC_Os08g36480 LOC_Os08g36500 LOC_Os02g58510 LOC_Os03g08050 LOC_Os03g08020 LOC_Os03g08010 LOC_Os09g32976 LOC_Os08g23710 LOC_Os05g42350 More.. |
| Downstream Genes | LOC_Os11g25260 LOC_Os12g03090 LOC_Os11g03400 LOC_Os10g16974 LOC_Os12g32240 LOC_Os11g25330 LOC_Os11g33120 LOC_Os12g35610 LOC_Os10g30410 LOC_Os10g30380 LOC_Os10g30390 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g38620.1 |
| Rice Genome Annotation | LOC_Os09g38620.1 |
| Ricechip | LOC_Os09g38620.1 |
| KEGG | osa:4347838 dosa:Os09t0558900-01 |
| Entrez-Gene | 4347838 |