RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g13800.1 View Network Show in Genome Browser |
| Other Names | Os10g0205200 |
| Description | ufm1-conjugating enzyme 1, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 7496071-7496943 Nucleotide Length: 558 |
| Protein-coding | LOC_Os10g13800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g50990 LOC_Os02g47140 LOC_Os03g08450 LOC_Os04g39700 LOC_Os05g47890 LOC_Os04g53220 LOC_Os07g10660 LOC_Os09g32976 LOC_Os08g23710 LOC_Os02g37862 LOC_Os07g10720 More.. |
| Downstream Genes | LOC_Os11g29190 LOC_Os11g05562 LOC_Os12g03880 LOC_Os11g04070 LOC_Os12g03090 LOC_Os11g03400 LOC_Os11g13540 LOC_Os11g40140 LOC_Os10g32820 LOC_Os10g18530 LOC_Os11g13530 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g13800.1 |
| Rice Genome Annotation | LOC_Os10g13800.1 |
| Ricechip | LOC_Os10g13800.1 |
| KEGG | osa:4348269 dosa:Os10t0205200-01 |
| Entrez-Gene | 4348269 |