RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g27174.1 View Network Show in Genome Browser |
| Other Names | Os10g0411700 |
| Description | 40S ribosomal protein S28, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 14323500-14324869 Nucleotide Length: 198 |
| Protein-coding | LOC_Os10g27174 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28750 LOC_Os01g19840 LOC_Os01g64090 LOC_Os07g10720 LOC_Os02g14059 LOC_Os02g27760 LOC_Os05g11710 LOC_Os01g10820 LOC_Os06g35730 LOC_Os02g21660 LOC_Os03g22180 More.. |
| Downstream Genes | LOC_Os11g05562 LOC_Os11g24610 LOC_Os11g41610 LOC_Os11g03400 LOC_Os10g32920 LOC_Os12g03090 LOC_Os12g38000 LOC_Os12g03880 LOC_Os11g04070 LOC_Os11g29190 LOC_Os11g38959 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g27174.1 |
| Rice Genome Annotation | LOC_Os10g27174.1 |
| Ricechip | LOC_Os10g27174.1 |
| KEGG | osa:4348607 dosa:Os10t0411700-01 |
| Entrez-Gene | 4348607 |