RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g27190.1 View Network Show in Genome Browser |
| Other Names | Os10g0411800 |
| Description | 40S ribosomal protein S17, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 14330689-14331558 Nucleotide Length: 426 |
| Protein-coding | LOC_Os10g27190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60400 LOC_Os01g61814 LOC_Os07g05580 LOC_Os04g35090 LOC_Os07g12650 LOC_Os02g30050 LOC_Os02g34460 LOC_Os02g18380 LOC_Os03g04750 LOC_Os09g24690 LOC_Os01g19840 More.. |
| Downstream Genes | LOC_Os10g32820 LOC_Os10g41470 LOC_Os10g32920 LOC_Os11g38959 LOC_Os12g21798 LOC_Os11g29190 LOC_Os12g05430 LOC_Os11g05562 LOC_Os12g03090 LOC_Os11g03400 LOC_Os12g03880 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g27190.1 |
| Rice Genome Annotation | LOC_Os10g27190.1 |
| Ricechip | LOC_Os10g27190.1 |
| KEGG | osa:4348608 dosa:Os10t0411800-01 |
| Entrez-Gene | 4348608 |