RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os10g38950.1 View Network Show in Genome Browser |
Other Names | Os10g0533600 |
Description | CGMC_MAPKCMGC_2_ERK.14 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20756089-20760021 Nucleotide Length: 1131 |
Protein-coding | LOC_Os10g38950 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0016043 | cellular component organization | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0008152 | metabolic process | Biological Process | IEA | |
GO:0006464 | protein modification process | Biological Process | IEA | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0007165 | signal transduction | Biological Process | IEA | |
GO:0016301 | kinase activity | Molecular Function | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0004871 | signal transducer activity | Molecular Function | IEA | |
GO:0005737 | cytoplasm | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g32660 LOC_Os02g15810 LOC_Os06g06090 LOC_Os01g69920 LOC_Os06g05520 LOC_Os02g05630 LOC_Os03g17700 LOC_Os01g74000 LOC_Os05g26890 LOC_Os06g27890 LOC_Os06g36770 More.. |
Downstream Genes | LOC_Os12g07590 LOC_Os12g12860 LOC_Os10g42950 LOC_Os10g41930 LOC_Os11g10100 LOC_Os12g19290 LOC_Os12g41180 LOC_Os12g30150 LOC_Os11g04170 LOC_Os12g03970 LOC_Os10g39540 More.. |
Reference | |
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PubMed | 17541629 16673940 20663089 |
Database Links | |
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Gramene | LOC_Os10g38950.1 |
Rice Genome Annotation | LOC_Os10g38950.1 |
Ricechip | LOC_Os10g38950.1 |
KEGG | osa:4349225 dosa:Os10t0533600-01 |
Entrez-Gene | 4349225 |