RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g41520.1 View Network Show in Genome Browser |
| Other Names | Os10g0564900 |
| Description | casein kinase II subunit beta-4, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22308889-22313883 Nucleotide Length: 843 |
| Protein-coding | LOC_Os10g41520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g02350 LOC_Os03g10940 LOC_Os04g25550 LOC_Os03g55490 LOC_Os05g08970 LOC_Os01g08970 LOC_Os06g08480 LOC_Os08g31240 LOC_Os07g29360 LOC_Os03g25260 LOC_Os03g52840 More.. |
| Downstream Genes | LOC_Os12g39070 LOC_Os12g26030 LOC_Os12g35030 LOC_Os12g02620 LOC_Os11g02670 LOC_Os12g38970 LOC_Os12g06910 LOC_Os11g10100 LOC_Os10g41960 LOC_Os12g06670 LOC_Os11g09280 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g41520.1 |
| Rice Genome Annotation | LOC_Os10g41520.1 |
| Ricechip | LOC_Os10g41520.1 |
| KEGG | osa:4349414 dosa:Os10t0564900-01 |
| Entrez-Gene | 4349414 |