RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g11390.1 View Network Show in Genome Browser |
| Other Names | Os11g0220800 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 6315122-6318852 Nucleotide Length: 675 |
| Protein-coding | LOC_Os11g11390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62350 LOC_Os05g38520 LOC_Os04g28180 LOC_Os01g64090 LOC_Os02g21660 LOC_Os03g18570 LOC_Os03g18580 LOC_Os02g28810 LOC_Os05g27940 LOC_Os05g06770 LOC_Os05g19370 More.. |
| Downstream Genes | LOC_Os11g29190 LOC_Os12g38000 LOC_Os12g21798 LOC_Os12g03880 LOC_Os12g07010 LOC_Os12g05430 LOC_Os11g41610 LOC_Os12g03090 LOC_Os12g41400 LOC_Os11g38959 LOC_Os12g07740 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g11390.1 |
| Rice Genome Annotation | LOC_Os11g11390.1 |
| Ricechip | LOC_Os11g11390.1 |
| KEGG | osa:4350098 dosa:Os11t0220800-01 |
| Entrez-Gene | 4350098 |