RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g16540.1 View Network Show in Genome Browser |
| Other Names | Os11g0266800 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 9144218-9151398 Nucleotide Length: 2703 |
| Protein-coding | LOC_Os11g16540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g23940 LOC_Os06g48310 LOC_Os02g12570 LOC_Os03g45410 LOC_Os02g34680 LOC_Os04g18010 LOC_Os05g13300 LOC_Os01g34614 LOC_Os05g46560 LOC_Os06g13999 LOC_Os06g13839 More.. |
| Downstream Genes | LOC_Os12g38380 LOC_Os12g39070 LOC_Os11g41890 LOC_Os12g34510 LOC_Os12g25120 LOC_Os12g35560 LOC_Os11g35390 LOC_Os12g43550 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g16540.1 |
| Rice Genome Annotation | LOC_Os11g16540.1 |
| Ricechip | LOC_Os11g16540.1 |
| KEGG | osa:4350254 dosa:Os11t0266800-01 |
| Entrez-Gene | 4350254 |