RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
---|---|
Locus Name | LOC_Os11g29380.1 View Network Show in Genome Browser |
Other Names | Os11g0484300 |
Description | MCM2 - Putative minichromosome maintenance MCM complex subunit 2, expressed |
Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 17036891-17044169 Nucleotide Length: 2886 |
Protein-coding | LOC_Os11g29380 |
Gene Ontology Classification | ||||
---|---|---|---|---|
GO | Name | Type | Code | |
GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
GO:0008150 | biological_process | Biological Process | IEA | |
GO:0009058 | biosynthetic process | Biological Process | IEA | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006259 | DNA metabolic process | Biological Process | IEA | |
GO:0009790 | embryo development | Biological Process | IEA | |
GO:0040007 | growth | Biological Process | IEA | |
GO:0007275 | multicellular organismal development | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0003677 | DNA binding | Molecular Function | IEA | |
GO:0016787 | hydrolase activity | Molecular Function | IEA | |
GO:0000166 | nucleotide binding | Molecular Function | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
---|---|
Upstream Genes | LOC_Os05g39850 LOC_Os02g55410 LOC_Os05g14590 LOC_Os01g63710 LOC_Os01g36390 LOC_Os11g03430 LOC_Os06g08790 LOC_Os03g08640 LOC_Os01g14610 LOC_Os04g10650 LOC_Os03g02680 More.. |
Downstream Genes | LOC_Os12g37400 LOC_Os12g03130 LOC_Os11g29390 LOC_Os12g26060 LOC_Os12g13950 LOC_Os11g40150 LOC_Os12g39210 LOC_Os12g31810 LOC_Os12g39070 LOC_Os12g07720 LOC_Os11g29690 More.. |
Database Links | |
---|---|
Gramene | LOC_Os11g29380.1 |
Rice Genome Annotation | LOC_Os11g29380.1 |
Ricechip | LOC_Os11g29380.1 |
KEGG | osa:4350526 dosa:Os11t0484300-01 |
Entrez-Gene | 4350526 |