RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g37080.1 View Network Show in Genome Browser |
| Other Names | Os11g0579800 |
| Description | h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 21883171-21888743 Nucleotide Length: 591 |
| Protein-coding | LOC_Os11g37080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g25450 LOC_Os02g57590 LOC_Os05g08360 LOC_Os02g40514 LOC_Os02g54700 LOC_Os07g44190 LOC_Os08g09350 LOC_Os06g16290 LOC_Os07g20580 LOC_Os02g49610 LOC_Os01g33030 More.. |
| Downstream Genes | LOC_Os12g38310 LOC_Os12g38000 LOC_Os12g43600 LOC_Os12g34510 LOC_Os11g41610 LOC_Os12g29660 LOC_Os12g01430 LOC_Os12g42150 LOC_Os12g05430 LOC_Os12g42370 LOC_Os12g33100 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g37080.1 |
| Rice Genome Annotation | LOC_Os11g37080.1 |
| Ricechip | LOC_Os11g37080.1 |
| KEGG | osa:4350782 dosa:Os11t0579800-01 |
| Entrez-Gene | 4350782 |