RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g41610.1 View Network Show in Genome Browser |
| Other Names | Os11g0634500 |
| Description | 40S ribosomal protein S29, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 24950781-24952708 Nucleotide Length: 171 |
| Protein-coding | LOC_Os11g41610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21940 LOC_Os01g19840 LOC_Os05g28750 LOC_Os03g04590 LOC_Os03g38260 LOC_Os10g32920 LOC_Os02g56960 LOC_Os02g27760 LOC_Os07g10720 LOC_Os04g52361 LOC_Os04g50990 More.. |
| Downstream Genes | LOC_Os12g38000 LOC_Os12g05430 LOC_Os12g03090 LOC_Os12g03880 LOC_Os12g07010 LOC_Os12g21798 LOC_Os12g38310 LOC_Os12g17910 LOC_Os12g41400 LOC_Os12g07740 LOC_Os12g31380 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g41610.1 |
| Rice Genome Annotation | LOC_Os11g41610.1 |
| Ricechip | LOC_Os11g41610.1 |
| KEGG | osa:4350976 dosa:Os11t0634500-00 |
| Entrez-Gene | 4350976 |