RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g04010.1 View Network Show in Genome Browser |
| Other Names | Os12g0133900 |
| Description | M-phase phosphoprotein 10, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 1663763-1668987 Nucleotide Length: 1629 |
| Protein-coding | LOC_Os12g04010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g43140 LOC_Os07g34740 LOC_Os03g22320 LOC_Os01g08770 LOC_Os03g51900 LOC_Os03g19960 LOC_Os10g35280 LOC_Os07g29320 LOC_Os07g33340 LOC_Os07g20580 LOC_Os03g22350 More.. |
| Downstream Genes | LOC_Os12g29660 LOC_Os12g43830 LOC_Os12g07300 LOC_Os12g06910 LOC_Os12g42150 LOC_Os12g36950 LOC_Os12g42370 LOC_Os12g09280 LOC_Os12g43100 LOC_Os12g42260 LOC_Os12g21798 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR529a |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g04010.1 |
| Rice Genome Annotation | LOC_Os12g04010.1 |
| Ricechip | LOC_Os12g04010.1 |
| KEGG | osa:4351433 dosa:Os12t0133900-01 |
| Entrez-Gene | 4351433 |