RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g13380.1 View Network Show in Genome Browser |
| Other Names | Os12g0236400 |
| Description | adenylate kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 7476416-7480311 Nucleotide Length: 726 |
| Protein-coding | LOC_Os12g13380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g46372 LOC_Os11g26850 LOC_Os07g15880 LOC_Os08g21840 LOC_Os03g07340 LOC_Os03g61260 LOC_Os06g39700 LOC_Os07g10660 LOC_Os08g15460 LOC_Os09g07910 LOC_Os03g12020 More.. |
| Downstream Genes | LOC_Os12g43630 LOC_Os12g33240 LOC_Os12g33100 LOC_Os12g41250 LOC_Os12g30490 LOC_Os12g37640 LOC_Os12g13390 LOC_Os12g42180 LOC_Os12g32986 LOC_Os12g32380 LOC_Os12g38000 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01100 rn01110 |
| Metacyc Pathways | DENOVOPURINE2-PWY P1-PWY PWY-6126 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g13380.1 |
| Rice Genome Annotation | LOC_Os12g13380.1 |
| Ricechip | LOC_Os12g13380.1 |
| KEGG | osa:4351850 dosa:Os12t0236400-01 |
| Entrez-Gene | 4351850 |