RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g17910.1 View Network Show in Genome Browser |
| Other Names | Os12g0277500 |
| Description | T-complex protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 10293567-10297912 Nucleotide Length: 1737 |
| Protein-coding | LOC_Os12g17910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g09679 LOC_Os02g54060 LOC_Os06g09688 LOC_Os03g25050 LOC_Os07g44740 LOC_Os10g41710 LOC_Os09g26730 LOC_Os08g44530 LOC_Os07g42450 LOC_Os10g34180 LOC_Os03g01910 More.. |
| Downstream Genes | LOC_Os12g37610 LOC_Os12g41400 LOC_Os12g32380 LOC_Os12g21798 LOC_Os12g35630 LOC_Os12g38000 LOC_Os12g29990 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g17910.1 |
| Rice Genome Annotation | LOC_Os12g17910.1 |
| Ricechip | LOC_Os12g17910.1 |
| KEGG | osa:4351976 dosa:Os12t0277500-01 |
| Entrez-Gene | 4351976 |