RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g32620.1 View Network Show in Genome Browser |
| Other Names | Os12g0510900 |
| Description | OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 19680028-19682088 Nucleotide Length: 588 |
| Protein-coding | LOC_Os12g32620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g15810 LOC_Os03g60720 LOC_Os02g34850 LOC_Os06g08400 LOC_Os03g16090 LOC_Os07g26440 LOC_Os04g32030 LOC_Os02g53520 LOC_Os05g32110 LOC_Os05g02820 LOC_Os07g14850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g32620.1 |
| Rice Genome Annotation | LOC_Os12g32620.1 |
| Ricechip | LOC_Os12g32620.1 |
| KEGG | osa:4352321 dosa:Os12t0510900-01 |
| Entrez-Gene | 4352321 |