RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g35360.1 View Network Show in Genome Browser |
| Other Names | Os12g0538900 |
| Description | vesicle tethering family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 21493823-21500844 Nucleotide Length: 2790 |
| Protein-coding | LOC_Os12g35360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g04450 LOC_Os02g25580 LOC_Os02g43690 LOC_Os01g08450 LOC_Os02g03450 LOC_Os04g18030 LOC_Os11g07280 LOC_Os02g37880 LOC_Os03g45260 LOC_Os01g17430 LOC_Os05g49150 More.. |
| Downstream Genes | LOC_Os12g42160 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g35360.1 |
| Rice Genome Annotation | LOC_Os12g35360.1 |
| Ricechip | LOC_Os12g35360.1 |
| KEGG | osa:4352428 dosa:Os12t0538900-01 |
| Entrez-Gene | 4352428 |