Gene Summary:

ncRNA Name: ath-MIR165a
Parent Gene: AT1G01183
Chromosome: 1
Start: 78927
End: 79037
Strand: -
Gemone reference: TAIR10

Genomic Sequence:
GTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAAC

Transcript Information:

Transcript Name: at1g01183
Sequence:
GTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAAC

sORF Information:

Start Codon:
Predicted by ORFfinder based on sequence information:

No sORF predicted by ORFfinder

Detected by RiboTish based on sequence information and Ribo-seq data:

No sORF detected by RiboTish

Expression:

Mean TPM: 0.8494282500263636
Standard Deviation:3.356607109342677

Co-Expression:

GenePearson CorrelationAdjacencyTOM Similarity
AT3G618970.7529600838534870.1033179144169980.0575965667776347
AT4G001650.7402572103775310.0901698132391080.0899441075719894
AT5G576500.7182552460227820.0708321547652040.0670383868130344
AT5G397900.7161909023664290.06921980948160970.0797640980069445
AT5G289100.6892101203370230.05091118056671850.0378692520205365
AT2G207220.6761664343611040.04369471036304130.0740666845932664
AT1G059070.6749327686450520.04306100014149860.0791610481847003
AT4G239900.6743535620198950.04276625751937320.0364204332430217
AT4G134100.6558370242760960.03422689035875420.0428214906290677
AT2G357440.6508973485176290.03221810698336490.0546229321646892
AT4G369800.6355891325664860.02663248576356910.0258935271875653
AT1G800500.6321426004100860.02549884265792330.0373293228952179
AT5G614200.62065327748210.02201873805270420.0407215965205448
AT4G168800.6157382725597760.02066184939515930.0437966883009037
AT4G188100.6134616847704840.02005855039846140.0549432111261411
AT1G184150.6101009917051630.01919613729447720.0289685943052907
AT1G566500.6088031208671050.01887187105513380.0313455741678879
AT5G568500.6074048151686170.01852788487558570.0418310101053863
AT4G025550.6064443875165290.01829480770478090.041699620836949
AT2G351300.6055293315905580.01807513211255350.0410920746854429