AthRiboNC - miRNA: ath-MIR4228

Gene Summary:

ncRNA Name: ath-MIR4228

Parent Gene: AT1G09687

Chromosome: 1

Start: 28889375

End: 28889532

Strand: +

Gemone reference: TAIR10

Genomic Sequence:
CGGCGTGTTGTTTTAACCTAATAGCCTTGAACGCCGTCGTTTCGTCTCCGACGACATTCACACGCGCACACTTCCACCCTTACCATCTATCCGTCTCACACGTGCGTCGGATGCGAAACGGTGGTGTTCAGGGATTTTTTAGGTTGCCGGATTTTACC

Transcript Information:

Transcript Name: at1g09687

Sequence:
CGGCGTGTTGTTTTAACCTAATAGCCTTGAACGCCGTCGTTTCGTCTCCGACGACATTCACACGCGCACACTTCCACCCTTACCATCTATCCGTCTCACACGTGCGTCGGATGCGAAACGGTGGTGTTCAGGGATTTTTTAGGTTGCCGGATTTTACC

sORF Information:

Expression:

Ignore zero expression

Mean TPM: 446.98407682393577

Standard Deviation:1458.8365969584502

Co-Expression:

Gene	Pearson Correlation	Adjacency	TOM Similarity
ath_circ_024896	0.814417581301031	0.193542846318971	0.152942660244317
ath_circ_025773	0.794549583508886	0.158842983146591	0.119658222288904
ath_circ_024481	0.782024338518453	0.139882104205323	0.138158048411983
AT3G16770	0.772170461380357	0.126387892697936	0.0667753520446216
ath_circ_024510	0.761795976853351	0.113425159358885	0.107892109005685
ath_circ_011978	0.756286228178673	0.107026059650392	0.117821765357014
ath_circ_024490	0.741973336154653	0.0918557587002074	0.113907987855257
ath_circ_011677	0.716251000617746	0.0692662910716824	0.119661758865729
AT5G24735	0.708994365937075	0.0638472611947192	0.039967327535258
AT1G09420	0.704043165506235	0.0603662635543294	0.0408346697896414
ath_circ_024482	0.69421749934515	0.0539466467741119	0.107699269329926
ath_circ_024483	0.684106041938695	0.0479719540044232	0.118147367033271
AT2G28056	0.683308494395677	0.0475263603684673	0.106676382941668
ath_circ_024494	0.682283116521895	0.0469588006635813	0.106742331388018
AT5G21020	0.672929442762979	0.0420490553523824	0.0357430581617776
AT3G05937	0.672643319687935	0.0419062372196856	0.0254686741309961
AT1G76490	0.665990229616812	0.0387028425648742	0.0349397438867353
AT1G22190	0.663410691782551	0.0375197323788528	0.0196908677962808
AT2G07632	0.658589634076093	0.0353931426533474	0.0598805446221526
AT2G22496	0.650625227705562	0.0321105090700298	0.0754765848765166