AthRiboNC - miRNA: ath-MIR157a

ncRNA Name: ath-MIR157a

Parent Gene: AT1G66783

Chromosome: 1

Start: 24913202

End: 24913299

Strand: -

Gemone reference: TAIR10

Genomic Sequence:
GTGTTGACAGAAGATAGAGAGCACAGATGATGAGATACAATTCGGAGCATGTTCTTTGCATCTTACTCCTTTGTGCTCTCTAGCCTTCTGTCATCACC

Transcript Name: at1g66783

Sequence:
GTGTTGACAGAAGATAGAGAGCACAGATGATGAGATACAATTCGGAGCATGTTCTTTGCATCTTACTCCTTTGTGCTCTCTAGCCTTCTGTCATCACC

Start Codon:

ATG

non-ATG

Predicted by ORFfinder based on sequence information:

Transcript	Start	End	Start Codon	Peptide Length	Sequence
at1g66783	27	83	ATG	18

Detected by RiboTish based on sequence information and Ribo-seq data:

No sORF detected by RiboTish

Ignore zero expression

Mean TPM: 0.11558039565751657

Standard Deviation:0.8751435095504589

Gene	Pearson Correlation	Adjacency	TOM Similarity
ath_circ_049494	0.741132087015765	0.0910258892279214	0.123164521072903
ath_circ_024976	0.727469069315355	0.0784361486663302	0.114214689389459
ath_circ_049456	0.725236045529231	0.0765305878709513	0.112848252140286
AT3G46086	0.586490880089084	0.0139987773427977	0.0310053614235885
AT1G06217	0.562462730692026	0.0100172844886773	0.0251160278913952
AT1G54773	0.558885785887288	0.00951885069632576	0.0225072649379492
AT3G23167	0.546910504295719	0.00800442460397804	0.0756785172925707
AT2G05415	0.515557340284997	0.00499132439429716	0.0609747265108198
AT4G23375	0.501755446734132	0.00401732312633935	0.0330084008871896
AT4G38405	0.496581177170633	0.0036976178898376	0.0428172771062309
AT1G07357	0.491479228131578	0.00340440594580482	0.0557382477903722
AT1G52185	0.490036533887775	0.00332527582436835	0.0887967491433858
AT3G06090	0.488061795351806	0.00321957469446827	0.0508624575307809
AT4G06285	0.484165302893777	0.00301959921892797	0.0870404801066658
AT1G04003	0.478002437812792	0.0027254667753887	0.0906219595978638
AT1G06103	0.478002437812792	0.0027254667753887	0.0906219595978638
AT1G06523	0.478002437812792	0.0027254667753887	0.0906219595978638
AT1G09717	0.478002437812792	0.0027254667753887	0.0906219595978638
AT2G17972	0.478002437812792	0.0027254667753887	0.0906219595978638
AT2G09105	0.478002437812792	0.0027254667753887	0.0906219595978638