AthRiboNC - miRNA: ath-MIR824

Gene Summary:

ncRNA Name: ath-MIR824

Parent Gene: AT4G24415

Chromosome: 4

Start: 12625094

End: 12625782

Strand: +

Gemone reference: TAIR10

Genomic Sequence:
TATCACCATTTGTACTTGAGTTGTCTCTCATGTCTAGACCATTTGTGAGAAGGGAGTTTTTGTTTACACCAATACCCCCCAGTCTCTAAATTTGTAAGAAGTATTATGCTCAATTAAGGAACATAGCTAGTTCGACATACCATACTACCCTTTTTAAAACTATCCTATATGTTTGATGCTAGCATAGCGTAATTTTGTGTTCTCATGGTGCAGCAGGGTTAGTTTATTGTGTACCTCTAGATATATATTCTCTTGCTGCGTAGGGTTCCCAAGCTGCCAAAAACTTTTAAAAATTAGTGATCTGTTCCCCAAACCCCCATTCAATAAGAAAGGTCTACCTGTAGCTCACAGTCACAGCTATTAGAGCTGTCCTTGCTTCTTTGGGTTTACTGTTTTAGTTAATTAGTTACCCTATGAAAGTCTGATCCTTCAGAAGTTAGGTATAGAAGTAAGTCGATTAAGTTCATTCATGACTTTTCCAGATGTTGCATACATAACTTTTTTTATTTGTATTCGAACTAGTCCAAGCCGATTCTCAAAATCATATAAAATCATTTACACCTTGGTCATGGTAGCTAAGAATATTGTATCTAAAATTGGGGAGTGGGGAGATGTTTGGTTATATTCCCTTCTCATCGATGGTCTAGATGTGCGAGGTGACTCTCATGGAGGTAAAGAACAATGGTGAT

Transcript Information:

Transcript Name: at4g24415

Sequence:
TATCACCATTTGTACTTGAGTTGTCTCTCATGTCTAGACCATTTGTGAGAAGGGAGTTTTTGTTTACACCAATACCCCCCAGTCTCTAAATTTGTAAGAAGTATTATGCTCAATTAAGGAACATAGCTAGTTCGACATACCATACTACCCTTTTTAAAACTATCCTATATGTTTGATGCTAGCATAGCGTAATTTTGTGTTCTCATGGTGCAGCAGGGTTAGTTTATTGTGTACCTCTAGATATATATTCTCTTGCTGCGTAGGGTTCCCAAGCTGCCAAAAACTTTTAAAAATTAGTGATCTGTTCCCCAAACCCCCATTCAATAAGAAAGGTCTACCTGTAGCTCACAGTCACAGCTATTAGAGCTGTCCTTGCTTCTTTGGGTTTACTGTTTTAGTTAATTAGTTACCCTATGAAAGTCTGATCCTTCAGAAGTTAGGTATAGAAGTAAGTCGATTAAGTTCATTCATGACTTTTCCAGATGTTGCATACATAACTTTTTTTATTTGTATTCGAACTAGTCCAAGCCGATTCTCAAAATCATATAAAATCATTTACACCTTGGTCATGGTAGCTAAGAATATTGTATCTAAAATTGGGGAGTGGGGAGATGTTTGGTTATATTCCCTTCTCATCGATGGTCTAGATGTGCGAGGTGACTCTCATGGAGGTAAAGAACAATGGTGAT

sORF Information:

Expression:

Ignore zero expression

Mean TPM: 0.107843206405708

Standard Deviation:0.5588069988341098

Co-Expression:

Gene	Pearson Correlation	Adjacency	TOM Similarity
AT5G00995	0.885594676216373	0.378338011414383	0.087237679022328
AT2G07005	0.853921564809393	0.28271174448014	0.0849477992918904
AT1G06743	0.85373395278626	0.282215217810165	0.0923572738428325
AT1G74045	0.81490385054958	0.194469258987526	0.195959643669017
AT3G03847	0.812435709964557	0.189806916429564	0.0888133198872241
AT5G06815	0.797530932916019	0.163674224656386	0.0650883288881064
AT3G04100	0.79706506929905	0.162910927283424	0.0538551786011987
AT5G00790	0.794249957317681	0.158364415165413	0.362242572813896
AT3G48475	0.794077612811598	0.158089715571195	0.361858675579985
AT5G05425	0.79324072740873	0.15676172468433	0.287544279377158
AT1G09587	0.792418494341574	0.155466501001868	0.31540662165431
AT5G08195	0.792195867100093	0.155117422184514	0.289856668129458
AT1G07757	0.792174400252597	0.155083798517576	0.311591007962565
AT5G56325	0.791683283428916	0.154316298822048	0.160795757768055
AT5G03335	0.789670348628435	0.151205172435722	0.336875899645786
AT5G41605	0.789636642685962	0.151153548346892	0.352024508202323
AT2G08715	0.788986638188765	0.150161012005349	0.302241743373927
AT4G18870	0.788708784661056	0.149738481386496	0.0996833784172062
AT1G53325	0.787711894060328	0.148231063736693	0.118062900058151
AT1G07725	0.787561365085892	0.148004603762663	0.354260978826862