AthRiboNC - miRNA: ath-MIR419

ncRNA Name: ath-MIR419

Parent Gene: AT4G32445

Chromosome: 4

Start: 15660370

End: 15660475

Strand: +

Gemone reference: TAIR10

Genomic Sequence:
AAATTATGAATGCTGAGGATGTTGTTATTACGAGCAATGAGATGTCTTTTTTTAAAAAAAAAAATTTGGTTGCTTGCTTGCAAGAGGACATCTTAGCATCAAATTT

Transcript Name: at4g32445

Sequence:
AAATTATGAATGCTGAGGATGTTGTTATTACGAGCAATGAGATGTCTTTTTTTAAAAAAAAAAATTTGGTTGCTTGCTTGCAAGAGGACATCTTAGCATCAAATTT

Start Codon:

ATG

non-ATG

Predicted by ORFfinder based on sequence information:

Transcript	Start	End	Start Codon	Peptide Length	Sequence
at4g32445	10	96	ATG	28

Detected by RiboTish based on sequence information and Ribo-seq data:

No sORF detected by RiboTish

Ignore zero expression

Mean TPM: 0.43292015779150333

Standard Deviation:3.598573378099916

Gene	Pearson Correlation	Adjacency	TOM Similarity
AT1G05980	0.836567654087403	0.23988801371803	0.403601156811596
AT4G09590	0.833193188259966	0.232255328129141	0.394370634901578
AT5G11220	0.826749958501381	0.218269701387243	0.112312131031159
AT3G04435	0.822620778983725	0.209699503867824	0.391634468571535
AT3G24710	0.820845829963575	0.206107013268573	0.384894343657336
AT5G61445	0.819952782869803	0.20431994048471	0.383142483663376
ath_circ_025621	0.813812569033398	0.192395603983855	0.336098151842375
AT2G17723	0.806906756435135	0.179716029682252	0.340510764199284
AT1G09747	0.800613136477688	0.168803595930886	0.337360366328186
AT3G26870	0.797612845141074	0.163808757272698	0.310179635457368
AT4G08730	0.783242683785483	0.141635061305323	0.314793805526046
AT4G08005	0.776718317153463	0.132467206244296	0.301860163653927
AT3G43837	0.759425203141403	0.110631817764213	0.0440472791668898
AT3G14362	0.75368026764947	0.104111129969127	0.210466834805908
AT1G66320	0.74176549155882	0.0916501123308162	0.0693389444911713
AT2G08825	0.738227849417391	0.0882111326096497	0.18151000456376
AT3G06445	0.729713451634084	0.0803931077262826	0.230212069098848
AT4G02950	0.719916977814059	0.0721538194381762	0.0805702499120956
AT1G46408	0.712088412469982	0.0661106382251898	0.187691482356532
AT1G64010	0.711458983826989	0.0656445902416499	0.179800433728254